Light Microscopy Facility Computers

Deep Thought

Location: Room 2.19A, Medawar Building

Offline analysis PC for general deconvolution, processing of data from the Carl Zeiss Multiphoton and Nikon NSTORM microscopes

• Dell Precision T7600

• Windows 7 64-bit

• 2x Intel XEON CPU E5-2620 2 GHz processors, 6 cores 12 logical processors

• 160 GB RAM

• AMD Radeon HD 7800 2 GB graphics card

• 2 TB C drive

• Software

  • Huygens Essential 16.05 with licences to deconvolve confocal, spinning disc, multiphoton and widefield data

  • Zen 2.1 Sp3 version 14.0.0.201 with modules for Airyscan processing, FRAP analysis, FCS analysis tools (FCS Basis, FCS Extended, FCS PCH) and linear unmixing

  • Nikon NIS-Elements 5.01 with module for processing molecular localisation data from the NSTORM microscope

  • SlideBook 6.0.15 full offline package for 3i spinning disc microscope

  • Volocity 6.3

  • Fiji

  • LAS AF Lite version 2.6.3

  • LAS X version 3.0.1.15878

  • Olympus FV10-ASW Viewer

Contact LM Facility for training and all other enquiries

Zen

Location: Room 2.20, Medawar Building

Offline analysis PC for data from Carl Zeiss Elyra PS1 super-resolution microscope

• HP Z840

• Windows 7 64-bit

• 2x Intel XEON CPU E5-2623, 3 GHz, 4 cores 8 logical processors

• 64 GB RAM

• NVidia Quadro K2200 1 GB graphics card

• 256 GB C drive and 1.5 TB D drive

• Software

  • Zen 2012 SP5 with analysis modules for PALM, 3D PALM and SIM as well as linear unmixing

  • FlowJo v 10.8.1

  • SlideBook Reader 6.0.4

  • Fiji

Contact: LM Facility for training and all other enquiries

Marvin

Location: Room 2.19A, Medawar Building

Offline analysis PC 

• Fujitsu D3598-B1

• Windows 10 Pro

• Intel(R) Xeon(R) W-2295 CPU @ 3.00GHz, 3000 Mhz, 18 Core(s), 36 Logical Processor(s)

• 512 GB RAM

• NVIDIA RTX A4000, 16GB 4DP graphics card

• 1.8TB C Drive, 3.64TB D, E, F & G Drives

• Software

  • Imaris 10

  • Huygens Professional

  • Carl Zeiss Zen Blue 3.2 analysis licence for LSM 900 Airyscan 2. Includes Airyscan Processing, 3DXL and Direct Processing.

  • LAS X 3.5.5

  • Fiji

Contact LM Facility for training and all other enquiries

Electron Microscopy Facility Computers

Beast

Location: Room 2.19A, Medawar Building

• SuperMicro X8DA3

• Windows 7 64-bit

• 2x Intel XEON CPU X5650 2.67 GHz, 6 cores, 12 logical processors

• 96 GB RAM

• NVidia Quadro K6000 1 GB graphic card

• 100 GB C drive, 1 TB D drive, 4 TB F drive

• Software

  • Imaris 7.6.5

  • Amira 6

  • iTEM

  • Graphpad Prism 7

  • R 3.2

  • Volocity 6.3

  • LAS AF Lite 2.4.1

  • Fiji

Contact Jemima Burden

Son of Beast

Location: Room 2.19A, Medawar Building

• SuperMicro X8DA3

• Windows 7 64-bit

• 2x Intel XEON CPU X5650 2.67 GHz, 6 cores, 12 logical processors

• 96 GB RAM

• NVidia GeForce GTX 580 1 GB graphics card

• 111 GB C drive, 896 GB D drive, 4 TB F drive

• Software

  • Amira 6

  • iTEM

  • Graphpad Prism 7

  • R 3.1.3

  • Volocity 6.3

  • Nikon NIS-Elements 4.6

  • SID4Bio

  • Fiji

Contact Jemima Burden