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Key Publications

Key Publications

Mar 27, 2020

Hoogenboom Group

  • Rudd-Schmidt, J. A., Hodel, A. W., Noori, T., Lopez, J. A., Cho, H., Verschoor, S., Ciccone, A., Trapani, A., Hoogenboom, B. W., Voskobonik, I. (2019). Lipid order and charge protect killer T cells from accidental death. Nat. Commun., 10 (1), 5396. doi: 10.1038/s41467-019-13385-x

  • Benn, G., Pyne, A. L. B., Ryadnov, M. G., Hoogenboom, B. W. (2019). Imaging live bacteria at the nanoscale: comparison of immobilisation strategies. Analyst 144, 6944. doi:10.1039/c9an01185d

  • Parsons, E. S., Stanley, G. J., Pyne, A. L. B., Hodel, A. W., Nievergelt, A. P., Menny, A., Yon, A.R., Rowley, A., Richter, R.P., Fantner, G. E., Bubeck, D., Hoogenboom, B. W. (2019). Single-molecule kinetics of pore assembly by the membrane attack complex. Nat. Commun., 10(1), 2066. doi:10.1038/s41467-019-10058-7

  • Heesterbeek, D. A., Bardoel, B. W., Parsons, E. S., Bennett, I., Ruyken, M., Doordujin, D. J., Gorham, R. D., Berends, E. T. M., Pyne, A. L. B., Hoogenboom, B. W., Rooijakkers, S. H. (2019). Bacterial killing by complement requires membrane attack complex formation via surface-bound C5 convertases. EMBO J. 38:e99852 doi:10.15252/embj.201899852

  • De Santis, E., Alkassem, H., Lamarre, B., Faruqui, N., Bella, A., Noble, J. E., Micale, N., Ray, S., Burns, J. R., Yon, A. R., Hoogenboom, B. W., Ryadnov, M. G. (2017). Antimicrobial peptide capsids of de novo design. Nat. Commun., 8 (1), 2263. doi:10.1038/s41467-017-02475-3

  • Leung, C., Hodel, A. W., Brennan, A. J., Lukoyanova, N., Tran, S., House, C. M., Kondos, S. C., Whisstock, J. C., Dunstone, M. A., Trapani, J. A., Voskoboinik, I., Saibil, H. R., Hoogenboom, B. W. (2017). Real-time visualization of perforin nanopore assembly. Nat. Nanotechnol. 12(5), 467-473. doi:10.1038/nnano.2016.303

  • Pyne, A., Pfeil, M. P., Bennett, I., Ravi, J., Iavicoli, P., Lamarre, B., Roethke, A., Ray, S., Jiang, H., Bella, A., Reisinger, B., Yin, D., Little, B., Munoz-Garcia, J. C., Cerasoli, E., Judge, P. J., Faruqui, N., Calzolai, L., Henrion, A., Martyna, G. J., Grovenor, C. R. M., Crain, J., Hoogenboom, B. W., Watts, A., Ryadnov, M. G. (2016). Engineering monolayer poration for rapid exfoliation of microbial membranes. Chemical Science 8 (2), 1105. doi:10.1039/C6SC02925F

  • Bestembayeva, A., Kramer, A., Labokha, A. A., Osmanovic, D., Liashkovich, I., Orlova, E. V., Ford, I. J., Charras, G., Fassati, A., Hoogenboom, B. W. (2015). Nanoscale stiffness topography reveals structure and mechanics of the transport barrier in intact nuclear pore complexes. Nat Nanotechnol. 10(1), 60-64. doi:10.1038/nnano.2014.262

  • Leung, C., Dudkina, N. V., Lukoyanova, N., Hodel, A. W., Farabella, I., Pandurangan, A. P., Jahan, N., Damaso, M. P., Osmanovic, D., Reboul, C. F., Dunstone, M. A., Andrew, P. W., Lonnen, R., Topf, M., Saibil, H. R., Hoogenboom, B. W. (2014). Stepwise visualization of membrane pore formation by suilysin, a bacterial cholesterol-dependent cytolysin. eLife 3, e04247. doi:10.7554/eLife.04247

  • Pyne, A., Thompson, R., Leung, C., Roy, D., Hoogenboom, B. W. (2014). Single-molecule reconstruction of oligonucleotide secondary structure by atomic force microscopy. Small, 10(16), 3257-3261. doi:10.1002/smll.201400265

Charras Group

  • Fritzsche, M., Erlenkämper, C., Moeendarbary, E., Charras, G., Kruse, K. (2016). Actin kinetics shapes cortical network structure and mechanics. Sci. Adv., 2(4), e1501337. doi: 10.1126/sciadv.1501337

  • Harris, A. R., Daeden, A., Charras, G, T. (2014). Formation of adherens junctions leads to the emergence of a tissue-level tension in epithelial monolayers. J. Cell. Sci., 127, 2507-2517. doi: 10.1242/jcs.142349

  • Chugh, P., Clark, A. G., Smith, M. B., Cassani, D, A. D., Dierkes, K., Ragab, A., Roux, P. P., Charras, G., Salbreux, G., Paluch, E. K. (2017). Actin cortex architecture regulates cell surface tension. Nat. Cell Biol., 19, 687-697. doi: 10.1038/ncb3525

  • Barriga, E., Franze, K., Charras, G., Mayor, R. (2018). Tissue stiffening coordinates morphogenesis by triggering collective cell migration in vivo. Nat., 554, 523-527. doi: 10.1038/nature25742

  • Mohammed D., Charras G., Vercruysse, E., Versaevel, M., Lantoine, J., Alaimo, L., Bruyère, C., Luciano, M., Glinel, K., Delhaye, G., Théodoly, O., Gabriele S. (2019). Substrate adhesive area confinement is a key determinant of cell velocity in collective migration. Nat. Phys., 15, 858-866. doi: 10.1038/s41567-019-0543-3

  • Khalilgharibi, N., Fouchard, J., Asadipour, N., Barrientos, R., Duda, M., Bonfanti, A., Yonis, A., Harris, A., Payman, M., Fujita, Y., Kabla, A., Mao, Y., Baum, B., Muñoz, J. J., Miodownik M., Charras G. (2019). Stress relaxation in epithelial monolayers is controlled by the actomyosin cortex. Nat. Phys., 15 839-847. doi: 10.1038/s41567-019-0516-6

Other Selected Publications

  • Papineau, D., De Gregorio, B. T., Sagar, J., Thorogate, R., Wang, J., Nittler, L., Kilcoyne, D. A., Marbach, H., Drost, M., Thornton, G. (2019). Fossil biomass preserved as graphitic carbon in a late Paleoproterozoic banded iron formation metamorphosed at more than 550°C. J. Geo. Soc. 176(4), jgs2018-097. doi: 10.1144/jgs2018-097

  • Hadjimichael, M., Zatterin, E., Fernandez-Peña, S., Leake, S. J., Zubko, P. (2018) Domain Wall Orientations in Ferroelectric Superlattices Probed with Synchrotron X-Ray Diffraction. Phys. Rev. Let. , 120 (3) , Article 037602. doi: 10.1103/PhysRevLett.120.037602

  • Zampetti, A., Minotto, A., Squeo, B. M., Gregoriou, V. G., Allard, S., Scherf, U., Chochos, C. L. (2017) Highly Efficient Solid-State Near-infrared Organic Light-Emitting Diodes incorporating A-D-A Dyes based on alpha,beta-unsubstituted "BODIPY" Moieties. Scien. Rep. , 7 , Article 1611. doi: 10.1038/s41598-017-01785-2.

  • Aguayo, S., Donos, N., Spratt, D., Bozec, L. (2015). Nanoadhesion of Staphylococcus aureus onto Titanium Implant Surfaces. J. Dent. Res., 94 (8), 1078-1084. doi:10.1177/0022034515591485

  • Aguayo, S., Bozec, L. (2016). Mechanics of Bacterial Cells and Initial Surface Colonisation. In M. C. Leake (Ed.), Biophys. Infect. (pp. 245-260). SPRINGER-VERLAG BERLIN. doi:10.1007/978-3-319-32189-9_15

  • Abdulsalam Ebrahim, M., Karan, S, Livingston, AG. (2020). On the influence of salt concentration on the transport properties of reverse osmosis membranes in high pressure and high recovery desalination. J. Mem. Sci., Vol: 594, ISSN: 0376-7388. doi: 10.10.1016/j.memsci.2019.117339

  • Zacco, E., Martin, S. M., Thorogate, R., Pastore A. (2018). The RNA-Recognition Motifs of TAR DNA-Binding Protein 43 May Play a Role in the Aberrant Self-Assembly of the Protein. Fron. Mol. Neurosci. 11, Article 372. doi: 10.3389/fnmol.2018.00372

  • Emendato, A., Milordini, G., Zacco, E., Sicorello, A., Dal Piaz, F., Guerrini, R., Thorogate, R., Picone, D., Pastore, A. (2018). Glycation affects fibril formation of Aβ peptides. J. Bio. Chem. 293, 13100-13111. doi: 10.1074/jbc.RA118.002275

  • Klejevskaja, B., Pyne, A. L. B., Reynolds, M., Shivalingam, A., Thorogate, R., Hoogenboom, B. W., Ying, L. (2016) Studies of G-quadruplexes formed within self-assembled DNA mini-circles. Chem. Comms. 52(84), 12454-12457. doi: 10.1039/c6cc07110d